🔬 PocketSense

Predict protein active sites and binding pockets from 3D structure

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How it works

  1. Upload a PDB file or paste PDB text
  2. The tool runs a geometric pipeline (SAS → flood-fill → DBSCAN clustering) to find candidate pockets
  3. A trained Random Forest model reranks them by ligandability
  4. View results in 3D and download CSV/PDB files

No data is stored — your PDB files are processed in memory and discarded.